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  5. Sopen12g001030

Sopen12g001030


Description : Ring finger domain


Gene families : OG_42_0000975 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001030
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At5g66070 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
Brara.F02529.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G00246.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.K01342.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.17G101800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G117640.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Kfl00037_0250 kfl00037_0250_v1.1 (at1g74410 : 129.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
LOC_Os10g39770 No alias zinc finger, C3HC4 type, domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.007G175900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc12g005020 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G20395.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 177 220
No external refs found!