1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.003G121400

Potri.003G121400


Description : MATE efflux family protein


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G121400
Cluster HCCA clusters: cluster_0188

Target Alias Description ECC score Gene Family Method Actions
A4A49_08271 No alias protein detoxification 55 0.04 Orthogroups_2024-Update
A4A49_09437 No alias protein detoxification 49 0.03 Orthogroups_2024-Update
At5g49130 No alias Protein DETOXIFICATION 55... 0.05 Orthogroups_2024-Update
Bradi3g51590 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi5g18830 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Brara.C01451.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.C04649.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.I00404.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Glyma.04G089000 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.16G198700 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
MA_2674g0010 No alias (at1g58340 : 654.0) ZF14; FUNCTIONS IN: antiporter... 0.03 Orthogroups_2024-Update
PSME_00022530-RA No alias (at1g71870 : 285.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Sobic.004G283500.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002528 MATE_fam 62 222
IPR002528 MATE_fam 283 446
No external refs found!