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Description : Core histone H2A/H2B/H3/H4
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen12g001250 | |
| Cluster | HCCA clusters: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g08880 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178W8H7] | 0.03 | Orthogroups_2024-Update | |
| Brara.C01065.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| Cre06.g265350 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
| Cre06.g266700 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
| Cre06.g268050 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
| Cre06.g274800 | No alias | histone H2A 10 | 0.05 | Orthogroups_2024-Update | |
| Cre12.g504750 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
| Cre17.g708550 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
| Cre17.g711700 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
| Cre17.g713400 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G151726 | No alias | histone H2A 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G022100 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G148100 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G215500 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G040300 | No alias | histone H2A 12 | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G040400 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G151400 | No alias | gamma histone variant H2AX | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G234100 | No alias | histone H2A 7 | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G008800.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G058810.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G070250.3 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G011620.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G021260.2 | No alias | histone *(H2A) | 0.07 | Orthogroups_2024-Update | |
| HORVU6Hr1G092390.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G100100.3 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G100110.4 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G100400.2 | No alias | histone *(H2A) | 0.08 | Orthogroups_2024-Update | |
| Kfl00099_g21 | kfl00099_g21_v1.1 | (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... | 0.02 | Orthogroups_2024-Update | |
| Kfl00125_0190 | kfl00125_0190_v1.1 | (p50567|h2a_chlre : 169.0) Histone H2A - Chlamydomonas... | 0.01 | Orthogroups_2024-Update | |
| MA_100910g0010 | No alias | (q6l500|h2a4_orysa : 148.0) Probable histone H2A.4 -... | 0.02 | Orthogroups_2024-Update | |
| MA_427046g0010 | No alias | (q84nj4|h2a3_orysa : 144.0) Probable histone H2A.3 -... | 0.02 | Orthogroups_2024-Update | |
| MA_865576g0010 | No alias | (p50567|h2a_chlre : 138.0) Histone H2A - Chlamydomonas... | 0.03 | Orthogroups_2024-Update | |
| Mp3g00840.1 | No alias | histone (H2A) | 0.01 | Orthogroups_2024-Update | |
| PSME_00008214-RA | No alias | (q75l11|h2a6_orysa : 120.0) Probable histone H2A.6 -... | 0.06 | Orthogroups_2024-Update | |
| PSME_00015856-RA | No alias | (q84nj4|h2a3_orysa : 144.0) Probable histone H2A.3 -... | 0.06 | Orthogroups_2024-Update | |
| Seita.2G287100.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Seita.3G063000.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Seita.3G347600.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G370600.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G370700.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
| Seita.9G450000.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G296700.1 | No alias | histone *(H2A) | 0.05 | Orthogroups_2024-Update | |
| Sobic.001G416800.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G329900.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G330000.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
| Solyc12g005270 | No alias | Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Sopen09g031570 | No alias | Core histone H2A/H2B/H3/H4 | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_533.4 | No alias | (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
| MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |