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  5. Potri.003G139100

Potri.003G139100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.003G139100
Cluster HCCA clusters: cluster_0116

Target Alias Description ECC score Gene Family Method Actions
A4A49_17242 No alias putative polygalacturonase 0.02 Orthogroups_2024-Update
A4A49_27803 No alias putative polygalacturonase 0.06 Orthogroups_2024-Update
At3g16850 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At3g61490 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At4g23820 No alias Pectin lyase-like superfamily protein... 0.04 Orthogroups_2024-Update
Bradi3g09597 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A01357.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.B03479.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G119494 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G153900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G244200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G256100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G146800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g50960 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g36810 No alias polygalacturonase, putative, expressed 0.04 Orthogroups_2024-Update
Mp7g13870.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Orthogroups_2024-Update
Potri.001G100000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G112100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s16_66V6 No alias polygalacturonase 0.03 Orthogroups_2024-Update
Pp1s294_11V6 No alias glycoside hydrolase family 28 expressed 0.03 Orthogroups_2024-Update
Seita.4G004900.1 No alias EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
Seita.5G229400.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.003G223100.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.010G005000.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc09g075460 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G16850.1) 0.03 Orthogroups_2024-Update
Sopen05g028340 No alias Glycosyl hydrolases family 28 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 139 420
No external refs found!