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  5. Sopen12g001290

Sopen12g001290


Description : GH3 auxin-responsive promoter


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001290
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
At5g13320 No alias Auxin-responsive GH3 family protein [Source:TAIR;Acc:AT5G13320] 0.04 Orthogroups_2024-Update
Bradi1g18200 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.05 Orthogroups_2024-Update
Bradi2g50840 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Brara.A00146.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Glyma.07G057900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.12G216700 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.U031110 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G092890.5 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
LOC_Os01g55940 No alias OsGH3.2 - Probable indole-3-acetic acid-amido... 0.03 Orthogroups_2024-Update
Seita.8G024800.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Sobic.001G331200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Sobic.002G361500.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Sobic.003G306500.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Sobic.003G319900.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Sobic.005G134200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004993 GH3 22 574
No external refs found!