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  5. Sopen12g001370

Sopen12g001370


Description : Cyclic nucleotide-binding domain


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001370
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Brara.A02466.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.J01954.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.02 Orthogroups_2024-Update
Glyma.07G056400 No alias cyclic nucleotide-gated channel 13 0.03 Orthogroups_2024-Update
MA_10437079g0010 No alias (at5g57940 : 425.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Seita.7G259800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc01g095770 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 510 597
IPR005821 Ion_trans_dom 75 406
No external refs found!