Potri.003G149600

Description : nucleotide binding;nucleic acid binding;RNA binding

Gene families : OG_42_0005036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.003G149600
Cluster	HCCA clusters: cluster_0096

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g21380	No alias	nucleotide binding;nucleic acid binding;RNA binding	0.05	Orthogroups_2024-Update
Glyma.14G154500	No alias	nucleotide binding;nucleic acid binding;RNA binding	0.03	Orthogroups_2024-Update
HORVU2Hr1G099630.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Kfl00130_0320	kfl00130_0320_v1.1	(at4g19610 : 468.0) nucleotide binding;nucleic acid...	0.03	Orthogroups_2024-Update
PSME_00000521-RA	No alias	(at4g19610 : 412.0) nucleotide binding;nucleic acid...	0.03	Orthogroups_2024-Update
Seita.7G233400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	4	72
IPR000504	RRM_dom	302	372
IPR000504	RRM_dom	719	786
IPR000504	RRM_dom	498	559
IPR000504	RRM_dom	619	693

External Links

No external refs found!