1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.003G169400

Potri.003G169400


Description : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G169400
Cluster HCCA clusters: cluster_0032

Target Alias Description ECC score Gene Family Method Actions
Brara.G02852.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.02 Orthogroups_2024-Update
Cre02.g104700 No alias squamosa promoter-binding protein-like 12 0.02 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.02 Orthogroups_2024-Update
Cre16.g686100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.01 Orthogroups_2024-Update
Glyma.05G019000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.06G168600 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
PSME_00047223-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s252_40V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Solyc07g062980 No alias Squamosa promoter-binding protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 24 97
No external refs found!