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  5. Potri.003G173900

Potri.003G173900


Description : heat shock protein 60


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G173900
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
At3g23990 No alias Chaperonin CPN60, mitochondrial... 0.03 Orthogroups_2024-Update
At5g56500 No alias Chaperonin 60 subunit beta 3, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi3g28070 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.07 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.02 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.15G250500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.02 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
MA_10436324g0010 No alias (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... 0.05 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Mp6g16880.1 No alias chaperone (Hsp60) 0.02 Orthogroups_2024-Update
PSME_00000058-RA No alias (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... 0.05 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.03 Orthogroups_2024-Update
PSME_00008710-RA No alias (q05046|ch62_cucma : 823.0) Chaperonin CPN60-2,... 0.03 Orthogroups_2024-Update
PSME_00011075-RA No alias (q05046|ch62_cucma : 883.0) Chaperonin CPN60-2,... 0.03 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.03 Orthogroups_2024-Update
Solyc05g053470 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.03 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.06 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.03 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.06 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.06 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.01 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
evm.model.tig00001107.20 No alias (q42694|ruba_chlre : 473.0) RuBisCO large... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 54 554
No external refs found!