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  5. Sopen12g001810

Sopen12g001810


Description : Aconitase family (aconitate hydratase)


Gene families : OG_42_0001446 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001810
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
132907 No alias aconitase 3 0.03 Orthogroups_2024-Update
A4A49_13645 No alias aconitate hydratase, cytoplasmic 0.03 Orthogroups_2024-Update
GRMZM2G020801 No alias aconitase 3 0.02 Orthogroups_2024-Update
Glyma.01G162800 No alias aconitase 1 0.04 Orthogroups_2024-Update
Glyma.11G080600 No alias aconitase 1 0.05 Orthogroups_2024-Update
Glyma.13G308700 No alias aconitase 3 0.03 Orthogroups_2024-Update
Pp1s131_178V6 No alias T3P4.5; aconitate hydratase, cytoplasmic, putative /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 148 651
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 780 908
No external refs found!