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  5. Sopen12g001870

Sopen12g001870


Description : Calponin homology (CH) domain


Gene families : OG_42_0001020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001870
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G045950.9 No alias fimbrin actin-crosslinking factor 0.02 Orthogroups_2024-Update
LOC_Os02g48740 No alias fimbrin-like protein 2, putative, expressed 0.02 Orthogroups_2024-Update
Solyc06g083070 No alias Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001715 CH-domain 515 616
IPR001715 CH-domain 267 368
IPR001715 CH-domain 393 495
IPR001715 CH-domain 150 236
No external refs found!