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  5. Potri.003G197600

Potri.003G197600


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G197600
Cluster HCCA clusters: cluster_0129

Target Alias Description ECC score Gene Family Method Actions
At3g47660 No alias Regulator of chromosome condensation (RCC1) family... 0.03 Orthogroups_2024-Update
Glyma.10G006300 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Glyma.11G168801 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
LOC_Os05g31920 No alias FYVE zinc finger domain containing protein, expressed 0.04 Orthogroups_2024-Update
Solyc11g065120 No alias Regulator of chromosome condensation (RCC1) family... 0.02 Orthogroups_2024-Update
Sopen03g035290 No alias Regulator of chromosome condensation (RCC1) repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027988 BRX_N 908 943
IPR013591 Brevis_radix_dom 1026 1080
IPR000306 Znf_FYVE 651 717
IPR000408 Reg_chr_condens 494 543
IPR000408 Reg_chr_condens 600 647
IPR000408 Reg_chr_condens 431 479
IPR000408 Reg_chr_condens 324 372
IPR000408 Reg_chr_condens 375 427
IPR000408 Reg_chr_condens 547 595
IPR001849 PH_domain 24 124
No external refs found!