1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen12g001920

Sopen12g001920


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001920
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.03 Orthogroups_2024-Update
A4A49_17723 No alias ethylene-responsive transcription factor 1 0.03 Orthogroups_2024-Update
At1g22985 No alias CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874] 0.04 Orthogroups_2024-Update
Bradi3g24000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g35600 No alias C-repeat/DRE binding factor 1 0.02 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.02 Orthogroups_2024-Update
Brara.A00159.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
Brara.E02487.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.E02695.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G060600 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.001G163700 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Potri.002G094200 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Potri.004G187001 No alias C-repeat/DRE binding factor 2 0.03 Orthogroups_2024-Update
Potri.011G061700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G205100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Solyc02g093130 No alias AP2/EREBP transcription factor_1 0.03 Orthogroups_2024-Update
Solyc04g012050 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc04g078640 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.06 Orthogroups_2024-Update
Solyc06g068360 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 25 75
No external refs found!