Potri.003G207100

Description : FAR1-related sequence 4

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.003G207100
Cluster	HCCA clusters: cluster_0001

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G114461	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
HORVU2Hr1G040290.3	No alias	FRS/FRF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os05g39790	No alias	transposon protein, putative, unclassified, expressed	0.05	Orthogroups_2024-Update
LOC_Os07g04860	No alias	transposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update
Potri.006G020700	No alias	far-red elongated hypocotyls 3	0.03	Orthogroups_2024-Update
Sopen06g030080	No alias	MULE transposase domain	0.02	Orthogroups_2024-Update
Sopen07g004620	No alias	MULE transposase domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	28	114
IPR018289	MULE_transposase_dom	227	320
IPR007527	Znf_SWIM	515	541

External Links

No external refs found!