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  5. Sopen12g001990

Sopen12g001990


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g001990
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_07883 No alias putative leucine-rich repeat receptor-like protein kinase 0.03 Orthogroups_2024-Update
Bradi5g14330 No alias receptor like protein 19 0.02 Orthogroups_2024-Update
Brara.G00416.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.14G173400 No alias receptor like protein 24 0.02 Orthogroups_2024-Update
Potri.012G025300 No alias receptor like protein 27 0.02 Orthogroups_2024-Update
Seita.6G164100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g014160 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g009520 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g100030 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 532 591
IPR001611 Leu-rich_rpt 672 729
IPR001611 Leu-rich_rpt 444 466
IPR001611 Leu-rich_rpt 395 409
IPR001611 Leu-rich_rpt 176 191
No external refs found!