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  5. Sopen12g002040

Sopen12g002040


Description : Cleavage site for pathogenic type III effector avirulence factor Avr


Gene families : OG_42_0001228 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g002040
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g07920 No alias NOI protein, nitrate-induced, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 3 38
No external refs found!