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  5. Potri.003G217800

Potri.003G217800


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_42_0001585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G217800
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
267628 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
HORVU5Hr1G109340.3 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.05 Orthogroups_2024-Update
Pp1s163_136V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.001G049500.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 Orthogroups_2024-Update
Sobic.005G175100.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.06 Orthogroups_2024-Update
Sopen01g001970 No alias DEAD/DEAH box helicase 0.02 Orthogroups_2024-Update
evm.model.tig00020544.5 No alias (at3g58570 : 468.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
evm.model.tig00020553.196 No alias (at3g58510 : 419.0) DEA(D/H)-box RNA helicase family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 181 364
IPR001650 Helicase_C 399 514
No external refs found!