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  5. Potri.003G223900

Potri.003G223900


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G223900
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
At2g33760 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.03 Orthogroups_2024-Update
At4g18750 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Orthogroups_2024-Update
Bradi3g57730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.F03378.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H00716.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G264700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G161900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G172502 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G252400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G146900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G091951 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G026070.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g27790 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_10164206g0010 No alias (at1g11290 : 670.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
MA_122899g0010 No alias (at3g57430 : 674.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_13057g0010 No alias (at4g33170 : 800.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_30949g0010 No alias (at3g57430 : 710.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_615077g0010 No alias (at3g12770 : 607.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
PSME_00036495-RA No alias (at1g11290 : 559.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Potri.014G087100 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G191200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G182501.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g038010 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen07g022420 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen09g031050 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen11g029050 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 213 260
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 289 312
IPR002885 Pentatricopeptide_repeat 389 413
No external refs found!