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  5. Potri.004G002400

Potri.004G002400


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G002400
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_15806 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_18078 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.03 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.03 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.03 Orthogroups_2024-Update
At2g24840 No alias Agamous-like MADS-box protein AGL61... 0.03 Orthogroups_2024-Update
At2g34440 No alias AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29] 0.03 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.03 Orthogroups_2024-Update
Bradi3g32090 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Brara.B01837.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.04 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Brara.C00694.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.C00925.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.04 Orthogroups_2024-Update
Brara.C04645.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D00221.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00310.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03027.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.I03965.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00749.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G010669 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G018589 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G026223 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
GRMZM2G099577 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.03 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.08G250800 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.05 Orthogroups_2024-Update
Glyma.09G283800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.10G084800 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.10G085900 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G008300.3 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g11414 No alias OsMADS58 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31748 No alias OsMADS20 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Potri.001G284600 No alias AGAMOUS-like 17 0.03 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Potri.012G062300 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Pp1s273_51V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Pp1s88_174V6 No alias mads box 0.02 Orthogroups_2024-Update
Seita.2G002300.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.4G160200.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G194800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G193300.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Solyc04g078300 No alias MADS-box transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g059970 No alias TPI 0.03 Orthogroups_2024-Update
Sopen02g034000 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 19 66
No external refs found!