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  5. Potri.004G002700

Potri.004G002700


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G002700
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
101888 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
171333 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
98534 No alias SPA1-related 4 0.04 Orthogroups_2024-Update
A4A49_24619 No alias protein suppressor of phya-105 1 0.03 Orthogroups_2024-Update
At2g32950 No alias FUS1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXE2] 0.02 Orthogroups_2024-Update
At2g46340 No alias SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9] 0.03 Orthogroups_2024-Update
Bradi2g15900 No alias SPA (suppressor of phyA-105) protein family 0.04 Orthogroups_2024-Update
Brara.C02328.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
Brara.E00142.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Brara.E01550.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.02 Orthogroups_2024-Update
Glyma.02G267800 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G214900 No alias SPA1-related 2 0.06 Orthogroups_2024-Update
Glyma.12G224600 No alias SPA1-related 3 0.03 Orthogroups_2024-Update
Glyma.13G276700 No alias SPA1-related 3 0.03 Orthogroups_2024-Update
Glyma.14G049700 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G090080.2 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
HORVU6Hr1G079680.3 No alias component *(COP1) of COP1-SPA light signal transduction... 0.02 Orthogroups_2024-Update
Pp1s25_325V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Pp1s30_295V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Sopen07g031310 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 399 436
IPR001680 WD40_repeat 485 521
No external refs found!