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  5. Potri.004G010200

Potri.004G010200


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G010200
Cluster HCCA clusters: cluster_0159

Target Alias Description ECC score Gene Family Method Actions
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
At2g03710 No alias Agamous-like MADS-box protein AGL3... 0.04 Orthogroups_2024-Update
At5g51870 No alias AGAMOUS-like 71 [Source:TAIR;Acc:AT5G51870] 0.03 Orthogroups_2024-Update
Brara.B03740.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.J01588.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
GRMZM2G044408 No alias AGAMOUS-like 44 0.02 Orthogroups_2024-Update
GRMZM2G137510 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.04G142550 No alias AGAMOUS-like 15 0.06 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
LOC_Os01g66030 No alias OsMADS2 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g01890 No alias MADS-box transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g41370 No alias OsMADS18 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
Seita.3G098400.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G432700.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G191901.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g103550 No alias LOW QUALITY:Transcription factor, MADS-box (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g015730 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g069430 No alias FRUITFULL-like MADS-box 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 24 72
No external refs found!