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  5. Potri.004G018000

Potri.004G018000


Description : pentatricopeptide repeat 336


Gene families : OG_42_0009188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G018000
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
At1g61870 No alias Pentatricopeptide repeat-containing protein At1g61870,... 0.09 Orthogroups_2024-Update
Bradi2g52250 No alias pentatricopeptide repeat 336 0.04 Orthogroups_2024-Update
Brara.A02572.1 No alias component *(mS76) of small mitoribosomal-subunit... 0.05 Orthogroups_2024-Update
Glyma.15G106500 No alias pentatricopeptide repeat 336 0.04 Orthogroups_2024-Update
Seita.5G345900.1 No alias component *(mS76) of small mitoribosomal-subunit... 0.05 Orthogroups_2024-Update
Sobic.003G322200.1 No alias component *(mS76) of small mitoribosomal-subunit... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 255 283
IPR002885 Pentatricopeptide_repeat 360 387
IPR002885 Pentatricopeptide_repeat 114 134
IPR002885 Pentatricopeptide_repeat 180 229
IPR002885 Pentatricopeptide_repeat 286 330
No external refs found!