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  5. Potri.004G019100

Potri.004G019100


Description : Pseudouridine synthase family protein


Gene families : OG_42_0005179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G019100
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18900 No alias Pseudouridine synthase family protein 0.04 Orthogroups_2024-Update
Mp7g18790.1 No alias RNA pseudouridine synthase 6, chloroplastic... 0.02 Orthogroups_2024-Update
Solyc02g080320 No alias Pseudouridine synthase family protein (AHRD V3.3 *** AT4G21770.1) 0.03 Orthogroups_2024-Update
Sopen02g025020 No alias RNA pseudouridylate synthase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
BP GO:0009451 RNA modification IEA InterProScan predictions
MF GO:0009982 pseudouridine synthase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluD 215 383
No external refs found!