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  5. Sopen12g002390

Sopen12g002390


Description : Aminotransferase class-III


Gene families : OG_42_0001993 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001993_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g002390
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
270846 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
HORVU2Hr1G098880.1 No alias GABA pyruvate transaminase & EC_2.6 transferase... 0.03 Orthogroups_2024-Update
LOC_Os08g10510 No alias aminotransferase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00011032-RA No alias (at3g22200 : 518.0) Genetically redundant with... 0.02 Orthogroups_2024-Update
Pp1s355_46V6 No alias aminotransferase y4ub 0.02 Orthogroups_2024-Update
Pp1s53_153V6 No alias aminotransferase y4ub 0.03 Orthogroups_2024-Update
Seita.6G029400.1 No alias GABA pyruvate transaminase & EC_2.6 transferase... 0.03 Orthogroups_2024-Update
Seita.7G236000.1 No alias GABA pyruvate transaminase & EC_2.6 transferase... 0.04 Orthogroups_2024-Update
Solyc08g014610 No alias Aminotransferase (AHRD V3.3 *** D2KZ08_WHEAT) 0.05 Orthogroups_2024-Update
Solyc12g006470 No alias viroid RNA-binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 84 498
No external refs found!