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  5. Potri.004G033900

Potri.004G033900


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G033900
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
168175 No alias auxin signaling F-box 2 0.02 Orthogroups_2024-Update
A4A49_03444 No alias coronatine-insensitive protein 1 0.03 Orthogroups_2024-Update
At3g62980 No alias TIR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA54] 0.03 Orthogroups_2024-Update
Bradi1g67160 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.D02421.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Brara.I04357.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.05 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G077570.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
MA_47869g0020 No alias (at4g24390 : 219.0) RNI-like superfamily protein; BEST... 0.03 Orthogroups_2024-Update
MA_78902g0010 No alias (at5g49980 : 364.0) auxin F-box protein 5 (AFB5);... 0.05 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.05 Orthogroups_2024-Update
PSME_00010803-RA No alias (at2g39940 : 593.0) Encodes a protein containing... 0.04 Orthogroups_2024-Update
PSME_00027400-RA No alias (at2g39940 : 611.0) Encodes a protein containing... 0.04 Orthogroups_2024-Update
Pp1s12_347V6 No alias coronitine insensitive 1 0.02 Orthogroups_2024-Update
Pp1s44_198V6 No alias afb2 gene for auxin signalling f-box protein AFB2 0.04 Orthogroups_2024-Update
Solyc06g007840 No alias No description available 0.04 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 165 182
No external refs found!