Potri.004G052700

Description : RNA helicase family protein

Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G052700
Cluster	HCCA clusters: cluster_0106

Target	Alias	Description	ECC score	Gene Family Method
At1g33390	No alias	FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]	0.03	Orthogroups_2024-Update
At2g47250	No alias	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.04	Orthogroups_2024-Update
Bradi4g16730	No alias	RNA helicase family protein	0.03	Orthogroups_2024-Update
PSME_00021187-RA	No alias	(at4g18465 : 449.0) RNA helicase family protein;...	0.02	Orthogroups_2024-Update
evm.model.contig_524.2	No alias	(at3g62310 : 724.0) RNA helicase family protein;...	0.01	Orthogroups_2024-Update
evm.model.tig00000113.111	No alias	(at1g33390 : 274.0) Over-expression of this gene results...	0.02	Orthogroups_2024-Update
evm.model.tig00022075.25	No alias	(at3g62310 : 1059.0) RNA helicase family protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011709	DUF1605	610	689
IPR001650	Helicase_C	272	400
IPR007502	Helicase-assoc_dom	463	551

External Links

No external refs found!