Potri.004G066000


Description : 20S proteasome beta subunit PBB2


Gene families : OG_42_0004476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004476_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G066000
Cluster HCCA clusters: cluster_0108

Target Alias Description ECC score Gene Family Method Actions
Bradi2g05660 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 Orthogroups_2024-Update
Bradi2g33390 No alias 20S proteasome beta subunit PBB2 0.04 Orthogroups_2024-Update
Cre10.g424400 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.06 Orthogroups_2024-Update
Kfl00092_0220 kfl00092_0220_v1.1 (at5g40580 : 380.0) Encodes 20S proteasome beta subunit... 0.01 Orthogroups_2024-Update
MA_10436996g0010 No alias (at5g40580 : 467.0) Encodes 20S proteasome beta subunit... 0.03 Orthogroups_2024-Update
Seita.5G412800.1 No alias beta-type-2 component *(PBB) of 26S proteasome 0.05 Orthogroups_2024-Update
Sobic.002G087000.1 No alias beta-type-2 component *(PBB) of 26S proteasome 0.05 Orthogroups_2024-Update
evm.model.contig_2096.8 No alias (at5g40580 : 329.0) Encodes 20S proteasome beta subunit... 0.03 Orthogroups_2024-Update
evm.model.tig00020848.74 No alias (at5g40580 : 305.0) Encodes 20S proteasome beta subunit... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 38 218
No external refs found!