1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.004G071800

Potri.004G071800


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G071800
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G048100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G226200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g50280 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Potri.007G068600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc11g017290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 184 225
IPR002885 Pentatricopeptide_repeat 587 631
IPR002885 Pentatricopeptide_repeat 385 432
IPR002885 Pentatricopeptide_repeat 83 129
IPR002885 Pentatricopeptide_repeat 286 330
IPR002885 Pentatricopeptide_repeat 663 686
IPR002885 Pentatricopeptide_repeat 159 178
IPR002885 Pentatricopeptide_repeat 460 486
No external refs found!