Potri.004G073500


Description : RNA binding Plectin/S10 domain-containing protein


Gene families : OG_42_0001576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001576_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G073500
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
37555 No alias RNA binding Plectin/S10 domain-containing protein 0.07 Orthogroups_2024-Update
A4A49_36949 No alias 40s ribosomal protein s10-3 0.09 Orthogroups_2024-Update
A4A49_64300 No alias 40s ribosomal protein s10-3 0.12 Orthogroups_2024-Update
At4g25740 No alias 40S ribosomal protein S10-1... 0.03 Orthogroups_2024-Update
Bradi2g61560 No alias RNA binding Plectin/S10 domain-containing protein 0.09 Orthogroups_2024-Update
Bradi3g43060 No alias RNA binding Plectin/S10 domain-containing protein 0.09 Orthogroups_2024-Update
Brara.A01568.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Brara.C01425.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Brara.D01152.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.H01564.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.K00178.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre09.g411100 No alias RNA binding Plectin/S10 domain-containing protein 0.11 Orthogroups_2024-Update
GRMZM2G171484 No alias RNA binding Plectin/S10 domain-containing protein 0.09 Orthogroups_2024-Update
Glyma.01G222100 No alias RNA binding Plectin/S10 domain-containing protein 0.16 Orthogroups_2024-Update
Glyma.11G021700 No alias RNA binding Plectin/S10 domain-containing protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G004700.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
HORVU3Hr1G111760.2 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
LOC_Os01g73160 No alias 40S ribosomal protein S10, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g35090 No alias 40S ribosomal protein S10, putative, expressed 0.05 Orthogroups_2024-Update
MA_111018g0010 No alias (q9ayp4|rs10_orysa : 184.0) 40S ribosomal protein S10 -... 0.06 Orthogroups_2024-Update
MA_314020g0010 No alias (q9ayp4|rs10_orysa : 182.0) 40S ribosomal protein S10 -... 0.04 Orthogroups_2024-Update
PSME_00025508-RA No alias (q9ayp4|rs10_orysa : 181.0) 40S ribosomal protein S10 -... 0.09 Orthogroups_2024-Update
PSME_00031081-RA No alias (q9ayp4|rs10_orysa : 170.0) 40S ribosomal protein S10 -... 0.06 Orthogroups_2024-Update
PSME_00038417-RA No alias (q9ayp4|rs10_orysa : 148.0) 40S ribosomal protein S10 -... 0.04 Orthogroups_2024-Update
Potri.013G027900 No alias RNA binding Plectin/S10 domain-containing protein 0.06 Orthogroups_2024-Update
Pp1s255_28V6 No alias 40s ribosomal protein s10 0.05 Orthogroups_2024-Update
Pp1s281_7V6 No alias 40s ribosomal protein s10 0.12 Orthogroups_2024-Update
Pp1s427_37V6 No alias 40s ribosomal protein s10 0.06 Orthogroups_2024-Update
Pp1s43_46V6 No alias 40s ribosomal protein s10 0.16 Orthogroups_2024-Update
Seita.5G462400.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Seita.7G099000.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.003G436700.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Sobic.006G081100.1 No alias component *(eS10) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Solyc01g099670 No alias meloidogyne-induced giant cell protein db212 0.13 Orthogroups_2024-Update
Solyc12g096540 No alias 40S ribosomal protein S10-like (AHRD V3.3 *** Q2XPV4_SOLTU) 0.03 Orthogroups_2024-Update
Sopen01g043180 No alias Plectin/S10 domain 0.15 Orthogroups_2024-Update
Sopen12g032370 No alias Plectin/S10 domain 0.12 Orthogroups_2024-Update
evm.model.contig_636.5 No alias (q9ayp4|rs10_orysa : 95.9) 40S ribosomal protein S10 -... 0.18 Orthogroups_2024-Update
evm.model.tig00001164.5 No alias (original description: no original description) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!