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  5. Sopen12g002900

Sopen12g002900


Description : Ring finger domain


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g002900
Cluster HCCA clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Brara.I01217.1 No alias E3 ubiquitin ligase *(RIE1) 0.03 Orthogroups_2024-Update
GRMZM2G081829 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.08G046000 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.19G124800 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
MA_10429094g0010 No alias (at4g11680 : 231.0) Zinc finger, C3HC4 type (RING... 0.02 Orthogroups_2024-Update
Seita.3G104300.1 No alias E3 ubiquitin ligase *(DRR1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 357 398
No external refs found!