Description : Pectin lyase-like superfamily protein
Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.004G073900 | |
Cluster | HCCA clusters: cluster_0189 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_27803 | No alias | putative polygalacturonase | 0.03 | Orthogroups_2024-Update | |
At3g48950 | No alias | Endo-polygalacturonase-like protein... | 0.03 | Orthogroups_2024-Update | |
Bradi3g09597 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g13260 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.05G210900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.15G146800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Sobic.004G113900.1 | No alias | EC_3.2 glycosylase | 0.04 | Orthogroups_2024-Update | |
Solyc05g049980 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) | 0.06 | Orthogroups_2024-Update | |
Sopen09g030250 | No alias | Glycosyl hydrolases family 28 | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 150 | 433 |
No external refs found! |