Potri.004G073900


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G073900
Cluster HCCA clusters: cluster_0189

Target Alias Description ECC score Gene Family Method Actions
A4A49_27803 No alias putative polygalacturonase 0.03 Orthogroups_2024-Update
At3g48950 No alias Endo-polygalacturonase-like protein... 0.03 Orthogroups_2024-Update
Bradi3g09597 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g13260 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G210900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G146800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Sobic.004G113900.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc05g049980 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) 0.06 Orthogroups_2024-Update
Sopen09g030250 No alias Glycosyl hydrolases family 28 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 150 433
No external refs found!