Potri.004G100000


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G100000
Cluster HCCA clusters: cluster_0030

Target Alias Description ECC score Gene Family Method Actions
Bradi4g08500 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Bradi4g08800 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Brara.D01185.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Cre02.g120100 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 Orthogroups_2024-Update
Glyma.13G046200 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G035720.5 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
HORVU2Hr1G010630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU2Hr1G010670.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU2Hr1G010690.15 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
HORVU5Hr1G033540.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
HORVU5Hr1G038630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
HORVU5Hr1G050990.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
LOC_Os12g19470 No alias ribulose bisphosphate carboxylase small chain,... 0.03 Orthogroups_2024-Update
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 Orthogroups_2024-Update
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Pp1s109_145V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Pp1s12_231V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Pp1s161_34V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Pp1s188_39V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Pp1s312_46V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Pp1s352_14V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Pp1s459_14V6 No alias Ribulose bisphosphate carboxylase small chain,... 0.02 Orthogroups_2024-Update
Pp1s46_42V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.05 Orthogroups_2024-Update
Pp1s545_4V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.03 Orthogroups_2024-Update
Seita.3G312000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Seita.3G312400.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Sobic.005G042000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Solyc02g063150 No alias RuBP carboxylase small subunit 0.03 Orthogroups_2024-Update
Solyc02g085950 No alias cell wall protein X77373 0.04 Orthogroups_2024-Update
Sopen02g030630 No alias Ribulose bisphosphate carboxylase, small chain 0.02 Orthogroups_2024-Update
Sopen03g007000 No alias Ribulose bisphosphate carboxylase, small chain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024680 RuBisCO_ssu_N 4 45
IPR000894 RuBisCO_sc_dom 71 179
No external refs found!