Potri.004G121400

Description : pescadillo-related

Gene families : OG_42_0005471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005471_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G121400
Cluster	HCCA clusters: cluster_0071

Target	Alias	Description	ECC score	Gene Family Method
At5g14520	No alias	Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LYK7]	0.04	Orthogroups_2024-Update
Brara.C00631.1	No alias	component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.04	Orthogroups_2024-Update
Cre16.g683793	No alias	pescadillo-related	0.03	Orthogroups_2024-Update
Glyma.19G232500	No alias	pescadillo-related	0.03	Orthogroups_2024-Update
Kfl00136_0090	kfl00136_0090_v1.1	(at5g14520 : 498.0) pescadillo-related; FUNCTIONS IN:...	0.01	Orthogroups_2024-Update
LOC_Os03g49210	No alias	BRCA1 C Terminus domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_185035g0010	No alias	(at5g14520 : 123.0) pescadillo-related; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Mp4g12860.1	No alias	component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.03	Orthogroups_2024-Update
Pp1s47_85V6	No alias	T15N1.10; pescadillo - like protein [Arabidopsis thaliana]	0.03	Orthogroups_2024-Update
evm.model.contig_2150.6	No alias	(at5g14520 : 301.0) pescadillo-related; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
evm.model.tig00020961.62	No alias	(at5g14520 : 240.0) pescadillo-related; FUNCTIONS IN:...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010613	PES	13	270
IPR001357	BRCT_dom	345	431

External Links

No external refs found!