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  5. Potri.004G123200

Potri.004G123200


Description : expansin A1


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G123200
Cluster HCCA clusters: cluster_0072

Target Alias Description ECC score Gene Family Method Actions
143857 No alias expansin A4 0.03 Orthogroups_2024-Update
179212 No alias expansin A15 0.02 Orthogroups_2024-Update
419575 No alias expansin A16 0.03 Orthogroups_2024-Update
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
A4A49_18887 No alias expansin-a1 0.02 Orthogroups_2024-Update
A4A49_26789 No alias expansin-a3 0.02 Orthogroups_2024-Update
A4A49_33199 No alias expansin-a15 0.05 Orthogroups_2024-Update
AC234190.1_FG001 No alias expansin A17 0.02 Orthogroups_2024-Update
At1g69530 No alias AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241] 0.04 Orthogroups_2024-Update
At3g03220 No alias Expansin-A13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P0] 0.02 Orthogroups_2024-Update
Bradi1g61190 No alias expansin A15 0.03 Orthogroups_2024-Update
Brara.C02080.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.E00178.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.F03107.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.K01453.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.06G143300 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.12G062700 No alias expansin A4 0.02 Orthogroups_2024-Update
Glyma.14G203900 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.04 Orthogroups_2024-Update
Kfl00557_0080 kfl00557_0080_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g51040 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_36587g0010 No alias (at2g40610 : 414.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
MA_915221g0010 No alias (at1g69530 : 376.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00000910-RA No alias (at5g05290 : 323.0) Encodes an expansin. Naming... 0.04 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00055878-RA No alias (at5g02260 : 159.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.05 Orthogroups_2024-Update
Potri.002G184700 No alias expansin A17 0.03 Orthogroups_2024-Update
Potri.006G108000 No alias expansin A8 0.04 Orthogroups_2024-Update
Potri.008G088300 No alias expansin A1 0.03 Orthogroups_2024-Update
Potri.009G031800 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.03 Orthogroups_2024-Update
Potri.016G135200 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s48_7V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s75_138V6 No alias alpha-expansin 8 0.02 Orthogroups_2024-Update
Seita.1G318000.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Seita.6G086300.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Seita.7G029300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.003G338801.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.004G121900.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.007G166500.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.009G173700.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Sopen03g034870 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 60 137
IPR007117 Expansin_CBD 148 225
No external refs found!