Potri.004G124100

Description : Pectate lyase family protein

Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G124100
Cluster	HCCA clusters: cluster_0173

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.17G011200	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
MA_10205415g0010	No alias	(at5g63180 : 429.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	None	Extended
MF	GO:0030570	pectate lyase activity	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002022	Pec_lyase	211	392
IPR007524	Pec_lyase_N	25	112

External Links

No external refs found!