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  5. Potri.004G125500

Potri.004G125500


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0002530 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G125500
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
Brara.I01471.1 No alias RNA editing factor *(MEF9) 0.02 Orthogroups_2024-Update
GRMZM2G077320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G024100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
MA_356g0010 No alias (at3g23330 : 487.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Seita.3G364500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G182600.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc05g009400 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.05 Orthogroups_2024-Update
Sopen01g039950 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen05g005200 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 456 481
IPR002885 Pentatricopeptide_repeat 252 281
IPR002885 Pentatricopeptide_repeat 283 313
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 188 216
IPR002885 Pentatricopeptide_repeat 218 251
No external refs found!