Potri.004G161700

Description : nucleic acid binding;zinc ion binding;DNA binding

Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G161700
Cluster	HCCA clusters: cluster_0130

Target	Alias	Description	ECC score	Gene Family Method
AC210173.4_FG002	No alias	nucleic acid binding;zinc ion binding;DNA binding	0.02	Orthogroups_2024-Update
Bradi1g77760	No alias	nucleic acid binding;zinc ion binding;DNA binding	0.02	Orthogroups_2024-Update
Sobic.001G196500.2	No alias	protein factor (NERD) of non-canonical RdDM pathway	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003169	GYF	1129	1167
IPR004343	Plus-3_dom	799	902
IPR003121	SWIB_MDM2_domain	660	733

External Links

No external refs found!