Potri.004G161800

Description : zinc knuckle (CCHC-type) family protein

Gene families : OG_42_0005846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G161800
Cluster	HCCA clusters: cluster_0047

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.G03360.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025836	Zn_knuckle_CX2CX4HX4C	169	185
IPR001878	Znf_CCHC	224	240
IPR001878	Znf_CCHC	105	120
IPR001878	Znf_CCHC	131	147
IPR001878	Znf_CCHC	150	166
IPR001878	Znf_CCHC	68	82
IPR001878	Znf_CCHC	48	64
IPR001878	Znf_CCHC	87	102
IPR001878	Znf_CCHC	204	218

External Links

No external refs found!