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  5. Potri.004G175300

Potri.004G175300


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_42_0002428 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G175300
Cluster HCCA clusters: cluster_0129

Target Alias Description ECC score Gene Family Method Actions
Brara.J01212.1 No alias component *(MSI1) of PRC2 histone methylation complex &... 0.04 Orthogroups_2024-Update
LOC_Os09g36900 No alias WD domain, G-beta repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp4g21020.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.01 Orthogroups_2024-Update
Seita.2G291200.1 No alias component *(CAF1c/MSI) of CAF1 histone chaperone complex... 0.03 Orthogroups_2024-Update
Seita.9G159200.1 No alias component *(MSI1) of PRC2 histone methylation complex &... 0.03 Orthogroups_2024-Update
evm.model.tig00000808.15 No alias (at5g58230 : 455.0) Encodes a WD-40 repeat containing... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 256 294
IPR001680 WD40_repeat 301 338
IPR001680 WD40_repeat 359 394
IPR001680 WD40_repeat 169 202
IPR001680 WD40_repeat 215 251
IPR022052 Histone-bd_RBBP4_N 17 90
No external refs found!