Potri.004G175900

Description : E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein

Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.004G175900
Cluster	HCCA clusters: cluster_0115

Target	Alias	Description	ECC score	Gene Family Method
At2g03190	No alias	SKP1-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:O81055]	0.03	Orthogroups_2024-Update
Glyma.02G045700	No alias	S phase kinase-associated protein 1	0.03	Orthogroups_2024-Update
LOC_Os09g10200	No alias	Skp1 family, dimerisation domain containing protein, expressed	0.02	Orthogroups_2024-Update
PSME_00003858-RA	No alias	(at5g42190 : 87.0) Similar to SKP1 in yeast and humans...	0.04	Orthogroups_2024-Update
PSME_00046645-RA	No alias	(at5g42190 : 166.0) Similar to SKP1 in yeast and humans...	0.02	Orthogroups_2024-Update
Pp1s28_148V6	No alias	kinetochore protein	0.04	Orthogroups_2024-Update
Sobic.010G218900.2	No alias	ASK-type linker component of SCF E3 ubiquitin ligase complexes	0.03	Orthogroups_2024-Update
Solyc01g111640	No alias	SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	5	64
IPR016072	Skp1_comp_dimer	112	159

External Links

No external refs found!