- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : 60S acidic ribosomal protein family
Gene families : OG_42_0001058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Populus release: Potri.004G185800 | |
| Cluster | HCCA clusters: cluster_0021 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 139397 | No alias | 60S acidic ribosomal protein family | 0.08 | Orthogroups_2024-Update | |
| At2g27710 | No alias | AT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3] | 0.06 | Orthogroups_2024-Update | |
| At3g44590 | No alias | Acidic ribosomal protein P2-like... | 0.06 | Orthogroups_2024-Update | |
| Bradi2g23830 | No alias | 60S acidic ribosomal protein family | 0.06 | Orthogroups_2024-Update | |
| Bradi5g09212 | No alias | 60S acidic ribosomal protein family | 0.12 | Orthogroups_2024-Update | |
| Bradi5g09217 | No alias | 60S acidic ribosomal protein family | 0.09 | Orthogroups_2024-Update | |
| Brara.C02416.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
| Brara.D01652.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Brara.G01325.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Cre02.g143050 | No alias | 60S acidic ribosomal protein family | 0.11 | Orthogroups_2024-Update | |
| GRMZM2G075630 | No alias | 60S acidic ribosomal protein family | 0.11 | Orthogroups_2024-Update | |
| GRMZM2G102891 | No alias | 60S acidic ribosomal protein family | 0.1 | Orthogroups_2024-Update | |
| GRMZM2G105712 | No alias | 60S acidic ribosomal protein family | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G119809 | No alias | 60S acidic ribosomal protein family | 0.11 | Orthogroups_2024-Update | |
| Glyma.03G193100 | No alias | 60S acidic ribosomal protein family | 0.04 | Orthogroups_2024-Update | |
| Glyma.10G067800 | No alias | 60S acidic ribosomal protein family | 0.07 | Orthogroups_2024-Update | |
| Glyma.12G182800 | No alias | 60S acidic ribosomal protein family | 0.08 | Orthogroups_2024-Update | |
| Glyma.13G318200 | No alias | 60S acidic ribosomal protein family | 0.06 | Orthogroups_2024-Update | |
| Glyma.19G193200 | No alias | 60S acidic ribosomal protein family | 0.06 | Orthogroups_2024-Update | |
| Glyma.U031221 | No alias | 60S acidic ribosomal protein family | 0.08 | Orthogroups_2024-Update | |
| HORVU1Hr1G073640.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Kfl00352_0050 | kfl00352_0050_v1.1 | (at2g27710 : 100.0) 60S acidic ribosomal protein family;... | 0.04 | Orthogroups_2024-Update | |
| LOC_Os05g37330 | No alias | 60S acidic ribosomal protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
| Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
| PSME_00022751-RA | No alias | (o24415|rla2b_maize : 100.0) 60S acidic ribosomal... | 0.07 | Orthogroups_2024-Update | |
| PSME_00050387-RA | No alias | (original description: no original description) | 0.07 | Orthogroups_2024-Update | |
| Pp1s14_289V6 | No alias | 60s acidic ribosomal protein | 0.09 | Orthogroups_2024-Update | |
| Pp1s21_165V6 | No alias | 60s acidic ribosomal protein | 0.12 | Orthogroups_2024-Update | |
| Pp1s30_261V6 | No alias | 60s acidic ribosomal protein | 0.08 | Orthogroups_2024-Update | |
| Pp1s51_319V6 | No alias | 60s acidic ribosomal protein | 0.1 | Orthogroups_2024-Update | |
| Seita.6G192700.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Seita.7G089200.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Sobic.006G067800.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Sobic.006G260400.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Sobic.009G242300.3 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
| Solyc06g074430 | No alias | 60s acidic ribosomal protein-like protein (AHRD V3.3 ***... | 0.07 | Orthogroups_2024-Update | |
| Solyc11g067100 | No alias | 60s acidic ribosomal family protein (AHRD V3.3 *** A9PCM7_POPTR) | 0.1 | Orthogroups_2024-Update | |
| Sopen01g004990 | No alias | 60s Acidic ribosomal protein | 0.06 | Orthogroups_2024-Update | |
| Sopen06g030910 | No alias | 60s Acidic ribosomal protein | 0.11 | Orthogroups_2024-Update | |
| Sopen11g026810 | No alias | 60s Acidic ribosomal protein | 0.07 | Orthogroups_2024-Update | |
| evm.model.contig_2346.3 | No alias | no hits & (original description: no original description) | 0.12 | Orthogroups_2024-Update | |
| evm.model.contig_3407.5 | No alias | no hits & (original description: no original description) | 0.13 | Orthogroups_2024-Update | |
| evm.model.tig00020830.75 | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |