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  5. Potri.004G188800

Potri.004G188800


Description : histone deacetylase 2C


Gene families : OG_42_0001839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G188800
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
A4A49_64689 No alias histone deacetylase hdt1 0.03 Orthogroups_2024-Update
At2g27840 No alias Histone deacetylase HDT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4T3] 0.04 Orthogroups_2024-Update
Bradi2g14120 No alias histone deacetylase 2B 0.03 Orthogroups_2024-Update
Brara.B00987.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.06 Orthogroups_2024-Update
Brara.D01665.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.05 Orthogroups_2024-Update
Glyma.12G181400 No alias histone deacetylase 2C 0.05 Orthogroups_2024-Update
LOC_Os05g51830 No alias ZOS5-12 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_601245g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Mp5g10240.1 No alias histone deacetylase (HDT/HD2) 0.02 Orthogroups_2024-Update
Pp1s7_389V6 No alias histone deacetylase 0.03 Orthogroups_2024-Update
Seita.3G117500.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.03 Orthogroups_2024-Update
Seita.5G422200.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.06 Orthogroups_2024-Update
Sobic.003G396600.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.03 Orthogroups_2024-Update
Sobic.009G211700.1 No alias HD2-type histone deacetylase *(HD2/HDT) 0.02 Orthogroups_2024-Update
Solyc09g009030 No alias Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH) 0.03 Orthogroups_2024-Update
evm.model.tig00000388.65 No alias (at4g25340 : 88.6) Encodes a member of the FKBP-type... 0.03 Orthogroups_2024-Update
evm.model.tig00000983.33 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!