Sopen12g004190


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004190
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_06211 No alias ethylene-responsive transcription factor erf003 0.05 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
Bradi1g46690 No alias related to AP2 12 0.02 Orthogroups_2024-Update
GRMZM2G099326 No alias ethylene response factor 7 0.03 Orthogroups_2024-Update
Mp7g00860.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00041310-RA No alias (at1g75490 : 82.8) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Pp1s117_32V6 No alias ap2 domain transcription factor 0.03 Orthogroups_2024-Update
Pp1s6_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 18 67
No external refs found!