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  5. Potri.004G205900

Potri.004G205900


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G205900
Cluster HCCA clusters: cluster_0065

Target Alias Description ECC score Gene Family Method Actions
150748 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
173093 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
A4A49_17130 No alias pentatricopeptide repeat-containing protein dot4, chloroplastic 0.03 Orthogroups_2024-Update
AC203841.3_FG002 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
At1g18485 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 Orthogroups_2024-Update
Bradi1g20230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g06450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g15700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g37360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g42710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g51740 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g52870 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g55520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g15307 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03196.1 No alias RNA editing factor *(CREF3) 0.06 Orthogroups_2024-Update
Brara.E00200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G060536 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G158839 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G171994 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G034600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G102300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G007880.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G028520.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G069210.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_9526611g0020 No alias (at3g57430 : 726.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 Orthogroups_2024-Update
Pp1s26_175V6 No alias T28P6.20; pentatricopeptide (PPR) repeat-containing... 0.03 Orthogroups_2024-Update
Seita.1G237400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G047600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G068700.1 No alias RNA editing factor *(CRR28) 0.02 Orthogroups_2024-Update
Seita.2G177900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G075900.1 No alias RNA editing factor *(ECD1) 0.05 Orthogroups_2024-Update
Seita.3G137300.1 No alias RNA editing factor *(ECB2/VAC1) 0.03 Orthogroups_2024-Update
Seita.4G216600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G361000.1 No alias RNA editing factor *(MEF10) 0.05 Orthogroups_2024-Update
Seita.9G015400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G068200.1 No alias RNA editing factor *(DEK36) 0.03 Orthogroups_2024-Update
Seita.9G151300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G025800.1 No alias RNA editing factor *(CRR22) 0.03 Orthogroups_2024-Update
Sobic.002G007000.2 No alias RNA editing factor *(ELI1) 0.02 Orthogroups_2024-Update
Sobic.003G223000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G246800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G122100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g007850 No alias Pentatricopeptide repeat superfamily protein, putative... 0.03 Orthogroups_2024-Update
Solyc11g008940 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g002910 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen01g041280 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen02g024180 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g034780 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen07g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen09g033130 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen11g029050 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 591 617
IPR002885 Pentatricopeptide_repeat 216 241
IPR002885 Pentatricopeptide_repeat 317 346
IPR002885 Pentatricopeptide_repeat 289 314
IPR002885 Pentatricopeptide_repeat 86 111
IPR002885 Pentatricopeptide_repeat 516 563
IPR002885 Pentatricopeptide_repeat 416 462
No external refs found!