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  5. Potri.004G209600

Potri.004G209600


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.004G209600
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.03 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.04 Orthogroups_2024-Update
A4A49_29196 No alias ring-h2 finger protein atl72 0.03 Orthogroups_2024-Update
A4A49_30300 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
At3g14320 No alias Putative RING-H2 finger protein ATL61... 0.03 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.03 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G409372 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G079170.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G105980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G015780.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G051480.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G051510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os10g42390 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_3380g0010 No alias (at1g49230 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.03 Orthogroups_2024-Update
Seita.1G186600.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.02 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G368500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G336200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G170300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G036400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc01g100100 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc04g014220 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Solyc12g087840 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc12g094690 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g033270 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen03g041450 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 85 129
No external refs found!