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  5. Sopen12g004490

Sopen12g004490


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004490
Cluster HCCA clusters: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.02 Orthogroups_2024-Update
A4A49_15668 No alias ethylene-responsive transcription factor rap2-12 0.03 Orthogroups_2024-Update
Bradi1g23756 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi5g08380 No alias related to AP2 6l 0.03 Orthogroups_2024-Update
Bradi5g17610 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.03 Orthogroups_2024-Update
Brara.H01777.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G147500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G042100 No alias DREB and EAR motif protein 3 0.04 Orthogroups_2024-Update
Glyma.15G004200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G048870.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G037540.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
HORVU6Hr1G074970.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
MA_9565296g0010 No alias (at1g01250 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00021283-RA No alias (at5g21960 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.003G054400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G072600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G023200 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Pp1s7_352V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Solyc03g005520 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen08g026680 No alias AP2 domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 53
No external refs found!