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  5. Sopen12g004510

Sopen12g004510


Description : NB-ARC domain


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004510
Cluster HCCA clusters: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G043300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Solyc12g009780 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Solyc12g099870 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 962 984
IPR001611 Leu-rich_rpt 1204 1226
IPR002182 NB-ARC 771 961
IPR002182 NB-ARC 455 631
IPR002182 NB-ARC 139 315
IPR001611 Leu-rich_rpt 1015 1036
IPR001611 Leu-rich_rpt 1039 1097
IPR001611 Leu-rich_rpt 1530 1587
IPR001611 Leu-rich_rpt 1229 1289
IPR001611 Leu-rich_rpt 1408 1467
No external refs found!