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  5. Sopen12g004520

Sopen12g004520


Description : Leucine rich repeat


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004520
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Seita.6G072100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g001770 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen01g003920 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 315 374
IPR001611 Leu-rich_rpt 219 277
IPR001611 Leu-rich_rpt 452 508
IPR001611 Leu-rich_rpt 197 210
No external refs found!