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  5. Sopen12g004540

Sopen12g004540


Description : Leucine Rich repeat


Gene families : OG_42_0001584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004540
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At2g25490 No alias EIN3-binding F-box protein 1... 0.03 Orthogroups_2024-Update
Glyma.04G066900 No alias EIN3-binding F box protein 1 0.03 Orthogroups_2024-Update
Glyma.06G068400 No alias EIN3-binding F box protein 1 0.04 Orthogroups_2024-Update
Glyma.13G166200 No alias EIN3-binding F box protein 1 0.05 Orthogroups_2024-Update
Glyma.14G116800 No alias EIN3-binding F box protein 1 0.05 Orthogroups_2024-Update
Glyma.17G211000 No alias EIN3-binding F box protein 1 0.05 Orthogroups_2024-Update
HORVU1Hr1G089690.6 No alias substrate(EIN3) adaptor of SCF E3 ubiquitin ligase *(EBF) 0.02 Orthogroups_2024-Update
Mp8g05840.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.02 Orthogroups_2024-Update
Seita.1G045500.1 No alias substrate(EIN3) adaptor of SCF E3 ubiquitin ligase *(EBF) 0.05 Orthogroups_2024-Update
Solyc07g008250 No alias EIN3-binding F-box-like protein (AHRD V3.3 *** G7I706_MEDTR) 0.03 Orthogroups_2024-Update
Solyc08g060810 No alias EIN3-binding F-box protein 2 0.05 Orthogroups_2024-Update
Solyc12g009560 No alias EIN3-binding F-box protein 1 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 59 99
IPR001611 Leu-rich_rpt 553 575
IPR001611 Leu-rich_rpt 236 259
IPR001611 Leu-rich_rpt 263 285
IPR001611 Leu-rich_rpt 211 234
IPR001611 Leu-rich_rpt 474 496
No external refs found!