Potri.005G002400

Description : AGAMOUS-like 80

Gene families : OG_42_0000774 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.005G002400
Cluster	HCCA clusters: cluster_0185

Target	Alias	Description	ECC score	Gene Family Method
At1g31640	No alias	Agamous-like MADS-box protein AGL92...	0.03	Orthogroups_2024-Update
Glyma.11G214600	No alias	AGAMOUS-like 80	0.03	Orthogroups_2024-Update
LOC_Os01g18440	No alias	OsMADS89 - MADS-box family gene with M-gamma type-box, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	51

External Links

No external refs found!